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1.
R Soc Open Sci ; 8(10): 211003, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34659780

ABSTRACT

Oil pollution is of increasing concern for environmental safety and the use of microbial surfactants in oil remediation has become inevitable for their efficacy and ecofriendly nature. In this work, biosurfactants of bacteria isolated from oil-contaminated soil have been characterized. Four potent biosurfactant-producing strains (SD4, SD11, SD12 and SD13) were selected from 27 isolates based on drop collapse assay and emulsification index, and identified as species belonging to Bacillus, Burkholderia, Providencia and Klebsiella, revealed from their 16S rRNA gene-based analysis. Detailed morphological and biochemical characteristics of each selected isolate were determined. Their growth conditions for maximum biosurfactant production were optimized and found quite similar among the four isolates with a pH of 3.0 and temperature 37°C after 6 or 7 days of growth on kerosene. The biosurfactants of SD4, SD11 and SD12 appeared to be glycolipids and that of SD13 a lipopeptide. Emulsification activity of most of the biosurfactants was stable at low and high temperatures (4-100°C), a wide range of pH (2-10) and salt concentrations (2-7% NaCl). Each biosurfactant showed antimicrobial activity against two or more pathogenic bacteria. The biosurfactants were well-capable of emulsifying kerosene, diesel and soya bean, and could efficiently degrade diesel.

2.
Preprint in English | medRxiv | ID: ppmedrxiv-21257473

ABSTRACT

BackgroundThe second wave of the COVID-19 pandemic has led to considerable morbidity and mortality in India, in part due to lack of healthcare access, low health literacy, and poor disease surveillance. In this retrospective, descriptive ecological study, we utilized Google Trends (GT) to characterize the second COVID-19 wave and its association with official case counts based on search terms related to symptoms, testing, disease complications, medications, preventive behaviors, and healthcare utilization. MethodsGT is a publicly available, online tracking system of Google searches. Searches are presented as relative search volumes (RSV) from 0 (least) to 100 (most number of searches). We performed pre-defined Web searches in India from 2/12/2021 to 5/09/2021. We characterized the peak RSV, RSV doubling rates, and Spearman rank correlation of selected search terms with official case counts. We also used date-adjusted linear regression to estimate the association between highly correlated search terms and official case counts. We then qualitatively classified public search queries into thematic groups to better understand public awareness and needs related to COVID-19. ResultsWe observed that searches for symptoms (most searched terms in order: fever, cough, headache, fatigue, chest pain), disease states (infection, pneumonia), COVID-19-related medications (remdesivir, ivermectin, azithromycin, Fabiflu, dexamethasone), testing modalities (PCR, CT Scan, D-dimer, C-reactive protein, oxygen saturation), healthcare utilization (oxygen cylinders, hospital, physician), and preventive behaviors (lockdown, mask, pulse oximetry, hand sanitizer, quarantine) all demonstrated increases, in line with increases in official case counts. Symptoms, PCR testing, outpatient medications, and preventive behaviors peaked around April 24th, approximately two weeks prior to the peak RSV in official case counts. Contrarily, healthcare utilization factors, including searches for hospital, physicians, beds, disease states, and inpatient medications did not peak until the first week of May. There were highly significant correlations between Coronavirus Disease 2019 (r=0.959), fever (r=0.935), pulse oximetry (r=0.952), oxygen saturation (r=0.944), C-reactive protein (r=0.955), D-Dimer (r=0.945), & Fabiflu (r=0.943) and official case counts. ConclusionGT search terms related to symptoms, testing, and medications are highly correlated with official case counts in India, suggesting need for further studies examining GTs potential use as a disease surveillance and public informant tool for public health officials.

3.
AIMS Microbiol ; 7(4): 528-545, 2021.
Article in English | MEDLINE | ID: mdl-35071947

ABSTRACT

Vertebrate intestine appears to be an excellent source of proteolytic bacteria for industrial and probiotic use. We therefore aimed at obtaining the gut-associated proteolytic species of Nile tilapia (Oreochromis niloticus). We have isolated twenty six bacterial strains from its intestinal tract, seven of which showed exoprotease activity with the formation of clear halos on skim milk. Their depolymerization ability was further assessed on three distinct proteins including casein, gelatin, and albumin. All the isolates could successfully hydrolyze the three substrates indicating relatively broad specificity of their secreted proteases. Molecular taxonomy and phylogeny of the proteolytic isolates were determined based on their 16S rRNA gene barcoding, which suggested that the seven strains belong to three phyla viz. Firmicutes, Proteobacteria, and Actinobacteria, distributed across the genera Priestia, Citrobacter, Pseudomonas, Stenotrophomonas, Burkholderia, Providencia, and Micrococcus. The isolates were further characterized by a comprehensive study of their morphological, cultural, cellular and biochemical properties which were consistent with the phylogenetic annotations. To reveal their proteolytic capacity alongside substrate preferences, enzyme-production was determined by the diffusion assay. The Pseudomonas, Stenotrophomonas and Micrococcus isolates appeared to be most promising with maximum protease production on casein, gelatin, and albumin media respectively. Our findings present valuable insights into the phylogenetic and biochemical properties of gut-associated proteolytic strains of Nile tilapia.

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