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1.
Braz. j. microbiol ; 46(1): 307-311, 05/2015.
Article in English | LILACS | ID: lil-748242

ABSTRACT

Patients who undergo dialysis treatment or a renal transplant have a high risk of blood-borne viral infections, including the Torque teno virus (TTV). This study identified the presence of TTV and its genome groups in blood samples from 118 patients in dialysis and 50 renal-transplant recipients. The research was conducted in a hospital in the city of Maringá, state of Paraná. The viral DNA, obtained from whole blood, was identified by using two nested Polymerase Chain Reactions (PCR). The frequencies of TTV were 17% and 36% in dialysis patients using the methodology proposed by Nishizawa et al. (1997) and Devalle and Niel (2004), respectively, and 10% and 54% among renal-transplant patients. There was no statistically significant association between the frequency of the pathogen and the variables: gender, time in dialysis, time since transplant, blood transfusions, and the concomitant presence of hepatitis B, for either the dialysis patients or the renal-transplant recipients. Among dialysis patients and renal-transplant recipients, genogroup 5 was predominant (48% and 66% respectively), followed by genogroup 4 (37% and 48%) and genogroup 1 (23% and 25%). Genogroup 2 was present in both groups of patients. Some patients had several genogroups, but 46% of the dialysis patients and 51% of the renal-transplant recipients had only a single genogroup. This study showed a high prevalence of TTV in dialysis patients and renal-transplant recipients.


Subject(s)
Adult , Aged , Female , Humans , Male , Middle Aged , Young Adult , Blood/virology , DNA Virus Infections/epidemiology , DNA Virus Infections/virology , Torque teno virus/classification , Torque teno virus/isolation & purification , Brazil/epidemiology , Coinfection/epidemiology , Coinfection/virology , Genotype , Hospitals , Kidney Transplantation , Polymerase Chain Reaction , Prevalence , Renal Dialysis , Transplant Recipients , Torque teno virus/genetics
2.
Braz. j. biol ; 72(4): 839-846, Nov. 2012. ilus, tab
Article in English | LILACS | ID: lil-660379

ABSTRACT

In order to verify the microbial quality of the influents and effluents of one STP from southern Brazil, an eight-month survey was conducted to examine the presence of total and fecal coliforms and of adenovirus (HAdV), enterovirus (EV), genogroup A rotaviruses (GARV) and Torque teno virus (TTV), in treated effluent samples from São João/Navegantes STP, Porto Alegre (Brazil). A total of 16 samples were collected, eight of influent (raw sewage, prior to treatment), and the other eight of the effluent (post-treatment sewage). Total and fecal coliform levels ranging from 3.6 × 10(4) to 4.4 × 10(7) MPN/100 mL and 2.9 × 10³ to 1.7 × 10(7) MPN/100 mL, were detected in all samples. In raw sewage, HAdV (25%) and GARV (28.6%) viral genomes were detected. The analysis of effluent samples revealed the presence of HAdV (50%), EV (37.5%), and TTV (12.5%) genomic fragments. All samples, regardless of the month analysed, presented detection of a least one virus genus, except for in April. Higher virus detection rates were observed in treated sewage samples (62.5%), and in 80% of them (effluent positive samples) HAdV was detected. Results showed that improvements in sewage monitoring and treatment processes are necessary to reduce the viral and bacterial load on the environment in southern Brazil. To the knowledge of the authors, this is the first study showing the monitoring of viral genomes in influent and effluent samples from a STP located in Porto Alegre (Rio Grande do Sul, Brazil), southern Brazil.


Com o intuito de verificar a qualidade microbiológica de afluentes e efluentes de uma estação de tratamento de esgoto (ETE), um monitoramento de oito meses foi realizado para examinar a presença de coliformes totais e fecais, e de adenovírus (HAdV), enterovírus (EV), rotavírus do genogrupo A (GARV) e torque teno vírus (TTV), em amostras de esgoto tratado da ETE São João/Navegantes, em Porto Alegre-RS, Brasil. Um total de 16 amostras foi coletado, sendo oito de afluente (esgoto bruto, anterior ao tratamento) e oito de efluente (esgoto tratado). Os níveis de coliformes totais e fecais variaram entre 3,6 × 10(4) e 4,4 × 10(7) MPN/100 mL e 2,9 × 10³ e 1,7 × 10(7) MPN/100 mL, respectivamente, tendo sido estes detectados em todas as amostras. No esgoto bruto, foram detectados os genomas virais de HAdV (25%) e GARV (28,6%). A análise das amostras de efluente revelou a presença de fragmentos genômicos de HAdV (50%), EV (37,5%) e TTV (12,5%). Todas as amostras, independentemente do mês analisado, possibilitaram a detecção de pelo menos um gênero viral, exceto no mês de abril. Altas taxas de detecção viral foram observadas em amostras de esgoto tratado (62,5%), sendo que o HAdV foi detectado em 80% dessas amostras de efluente positivas. Os resultados mostram que aprimoramentos no processo de tratamento e monitoramento do esgoto são necessários para reduzir a carga viral e bacteriológica no ambiente do Sul do Brasil. Ao conhecimento dos autores, este é o primeiro estudo de monitoramento de genomas virais em amostras de afluente e efluente de uma ETE localizada em Porto Alegre-Rio Grande do Sul, Brasil.


Subject(s)
DNA Viruses/classification , RNA Viruses/classification , Sewage/virology , Water Microbiology , Adenoviridae/isolation & purification , Brazil , DNA Viruses/isolation & purification , DNA, Viral , Enterovirus/isolation & purification , Polymerase Chain Reaction , RNA Viruses/isolation & purification , Rotavirus/isolation & purification , Torque teno virus/isolation & purification , Waste Disposal, Fluid , Water Purification
3.
Indian J Pathol Microbiol ; 2012 Oct-Dec 55(4): 478-480
Article in English | IMSEAR | ID: sea-145640

ABSTRACT

Background: SEN virus (SEN-V) and TT virus (TTV) have been classified in the circoviridae family. Both are single-stranded, non-enveloped DNA viruses of about 3800 nucleotides. Patients on maintenance hemodialysis (HD) have a high risk of blood-borne viral infections. SEN-V and TTV has been reported from a number of HD units from various countries throughout the world. Materials and Methods: A total of 377 blood samples obtained from 150 healthy donors and 227 HD patients were collected at the HD center. SEN-V and TTV DNA was determined by polymerase chain reaction (PCR) in all samples. Results: TTV was detected in 109 (48.01%) of 227 hemodialysed patients and 14 (9.33%) of 150 voluntary blood donors (significant, P < 0.05). The PCR results for SEN-V-D/H DNA showed that 65 (28.63%) were positive for SEN-V-D and 33 (14.53%) were positive for SEN-V-H. 9.69% of 227 patients were positive for SEN-V-D/H co-infection. In the control group, SEN-V-D was detected in 14 (9.33%) and SEN-V-H was detected in 15 (10%) of the 150 (100%) blood donors. Conclusion: These findings show that the prevalence of SEN-V-D/H and TTV is higher than healthy blood donors. Also, these results indicate that the prevalence of SEN-V and TTV infections in our region is similar with that in other countries.


Subject(s)
Blood Donors , DNA Virus Infections/blood , DNA Virus Infections/diagnosis , DNA Virus Infections/epidemiology , DNA Virus Infections/isolation & purification , Humans , Iran/epidemiology , Patients , Renal Dialysis/statistics & numerical data , Torque teno virus/isolation & purification
4.
Mem. Inst. Oswaldo Cruz ; 107(5): 684-686, Aug. 2012. tab
Article in English | LILACS | ID: lil-643756

ABSTRACT

This study investigates the frequency of Torque teno virus (TTV) infection in 150 blood donors and 77 patients requiring haemodialysis in southern Brazil. Plasma samples were screened for TTV DNA using polymerase chain reaction (PCR). The prevalences of TTV among blood donors and patients requiring haemodialysis were 73.3% and 68.8%, respectively. The presence of TTV was correlated with age in the blood donors (p = 0.024). In haemodialysis patients, no association was found between TTV infection and the demographic parameters (age, sex and education), the duration of haemodialysis or a history of blood transfusion. This study is the first to evaluate the prevalence of TTV infection in Brazilian patients requiring haemodialysis.


Subject(s)
Adolescent , Adult , Aged , Aged, 80 and over , Female , Humans , Male , Middle Aged , Young Adult , Blood Donors , DNA Virus Infections/epidemiology , Renal Dialysis , Torque teno virus/isolation & purification , Brazil/epidemiology , Cross-Sectional Studies , DNA Virus Infections/blood , DNA Virus Infections/diagnosis , Educational Status , Polymerase Chain Reaction , Prevalence , Risk Factors , Time Factors , Torque teno virus/genetics
5.
Braz. j. biol ; 72(2): 323-329, May 2012. ilus, tab
Article in English | LILACS | ID: lil-639441

ABSTRACT

Adenovirus (AdV), enterovirus (EV), genogroup A rotaviruses (GARV) and Torque teno virus (TTV) are non-enveloped viral agents excreted in feces and so may contaminate water bodies. In the present study, the molecular detection of these viruses was performed in samples of surface water collected from the Arroio Dilúvio, a waterstream that crosses the city of Porto Alegre, RS, Brazil, receiving great volumes of non-treated sewage from a large urban area. Sampling was performed during 2009, in three different occasions (January, April and September). The highest detection rate was observed for EV (64.28%), followed by TTV (28.57%) and AdV (21.43%). Rotaviruses were not detected. More than on kind of tested virus was detected in five (35. 71%) of 14 samples. January was the month with the highest viral detection rate, being all samples, collected in this month, positive for at least one group of tested virus. The correlation between the detection of these different viral agents and environmental factors is discussed. To the knowledge of the authors, this is the first description of viral genomes in water samples taken from the Arroio Dilúvio, Porto Alegre (Brazil).


Adenovírus (AdV), enterovírus (EV), rotavírus (GARV) e Torque teno vírus (TTV) são vírus não envelopados, excretados nas fezes, podendo, assim, contaminar corpos hídricos. No presente estudo, a detecção molecular desses agentes foi realizada em amostras de águas superficiais provenientes do Arroio Dilúvio, o qual cruza a cidade de Porto Alegre-RS, Brasil. As amostras foram coletadas em três meses diferentes (janeiro, abril e setembro) do ano de 2009. A maior taxa de detecção viral foi observada para EV (64,28%), seguida por TTV (28,57%) e AdV (21,43%). Rotavírus não foi detectado. Foi verificada presença simultânea de dois grupos virais em cinco (35,71%) das 14 amostras analisadas. Janeiro foi o mês com a maior taxa de detecção viral, sendo todas as amostras, coletadas nesse mês, positivas para, no mínimo, um grupo viral em estudo. A correlação entre a detecção desses diferentes agentes virais e os fatores ambientais é discutida. Conforme conhecimento dos autores, essa é a primeira descrição de genomas virais em amostras de água provenientes do Arroio Dilúvio, Porto Alegre, Brasil.


Subject(s)
Adenoviridae/isolation & purification , Enterovirus/isolation & purification , Rotavirus/isolation & purification , Torque teno virus/isolation & purification , Water Microbiology , Adenoviridae/genetics , Brazil , DNA, Viral/genetics , Enterovirus/genetics , Polymerase Chain Reaction , Rivers , Rotavirus/genetics , Torque teno virus/genetics
6.
Pesqui. vet. bras ; 32(4): 313-318, Apr. 2012. ilus, tab
Article in English | LILACS | ID: lil-626464

ABSTRACT

This study evaluated histological lesions in kidney samples from pigs with nephritis in two slaughterhouses in the State of Mato Grosso, Brazil. Four hundred samples were subjected to histology, anti-porcine circovirus type 2 (PCV2) immunohistochemistry (IHC), anti-Leptospira sp. immunofluorescence (IF), and polymerase chain reaction (PCR) for PCV2, porcine parvovirus (PPV), and Torque teno virus type 1 and 2 (TTV1, TTV2) detection. Histological lesions were found in 81% of the samples, and mononuclear interstitial nephritis was the most frequent lesion (77.50%). A follicular pattern was observed in 40.97% of the interstitial nephritis lesions. PCV2, PPV, TTV1, and TTV2 were identified in the kidneys by PCR in 27.25%, 28.50%, 94%, and 87.5% of the samples, respectively. Leptospira sp. was not detected through IF. Infection by PCV2 (PCR) and the presence of histological lesions (P=0.008) and giant cells (P=0.0016) were significantly associated. An association was observed between the TTV2-TTV1 co-infection (P<0.0001) and the risk for pathogenesis. These findings indicated that PCV2, PPV, TTV1, and TTV2 were widely distributed among pigs in the local farms and that the presence of these agents should be considered in the differential diagnosis of kidneys with interstitial nephritis in pigs.


O propósito desse estudo foi avaliar as lesões histológicas observadas em rins condenados por nefrite pelo Serviço de Inspeção Federal, em dois frigoríficos de Mato Grosso, Brasil. Foram coletados 400 rins condenados por nefrite e submetidos aos exames de histologia, imuno-histoquímica (IHC) para Circovirus suíno Tipo 2 (PCV2), imunofluorescência direta (IF) para Leptospira sp. e reação em cadeia pela polimerase (PCR) para detecção de PCV2, Parvovirus suíno (PPV) e Torque teno vírus Tipo 1 e 2 (TTV1 e TTV2). Foram observadas lesões histológicas em 81% das amostras, sendo nefrite intersticial mononuclear a mais freqüente (77,50%). Das lesões de nefrite intersticial encontradas, 40,97% apresentaram padrão folicular. Através da PCR foi observada ampla distribuição dos agentes (PCV2, PPV, TTV1 e TTV2) nas propriedades e municípios, com ocorrência de 27,25%, 28,50%, 94% e 87,50%, respectivamente. Leptospira sp. não foi detectada através da IF. Houve associação significativa da infecção do PCV2 com presença de lesão histológica (P=0,008) e de células gigantes (P=0,0016). Também houve associação entre a co-infecção TTV2 e TTV1 (P<0,0001). Esses achados indicam que os vírus PCV2, PPV, TTV1 e TTV2 devem ser considerados no diagnóstico diferencial de rins com nefrite intersticial em suínos.


Subject(s)
Animals , Autopsy/veterinary , Nephritis, Interstitial/veterinary , Kidney/physiopathology , Swine Diseases , Circovirus/isolation & purification , Parvovirus, Porcine/isolation & purification , Torque teno virus/isolation & purification
7.
Braz. j. oral sci ; 9(2): 94-97, Apr.-June 2010. ilus, tab
Article in English | LILACS, BBO | ID: lil-578072

ABSTRACT

Torque teno virus (TTV), a novel DNA virus resides in peripheral blood mononuclear cells and replicates when these cells get activated. The TTV replication shifts the immunobalance. Aim: To determine the presence of TTV in the gingiva of patients with aggressive periodontitis, patients withchronic periodontitis, and healthy controls, and to correlate the presence of TTV with probing pocket depth and clinical attachment level. Methods: Forty-two subjects (22 males and 20 females)aged 21 to 55 years were recruited for this study. Subjects were stratified into aggressive periodontitis (Group I), chronic periodontitis (Group II) and healthy controls (Group III). Gingival tissue biopsy was taken from all the subjects and the presence of TTV was analyzed using PCR and 2% agarose gel electrophoresis. Results: TTV was identified in half of the subjects and more number of subjects with periodontitis have TT virus compared to controls. There was significant association between presence of TT virus and pocket depth, clinical attachment level. Conclusions: The findings from the present study shows that there was no significant association between TT virus and periodontitis, even though it was isolated from more number of subjects with aggressive periodontitis, and TTV was associated with pocket depth and clinical attachment level. These findings need to be investigated in further studies.


Subject(s)
Humans , Male , Female , Adult , Middle Aged , Polymerase Chain Reaction , Periodontitis/virology , Torque teno virus/isolation & purification , Analysis of Variance , Dental Plaque Index , India/epidemiology
8.
Article in English | IMSEAR | ID: sea-135479

ABSTRACT

Background & objectives: TT virus (TTV) is a newly discovered non-enveloped, single stranded DNA virus of high genotypic variability, found frequently in patients with acute or chronic hepatitis of non A-G aetiology. This study was carried out to look for the presence of TTV and its genotypes in patients with different types of liver diseases from northern India. Methods: A total of 262 serum samples from patients of acute viral hepatitis (AVH; n=72), fulminant hepatic failure (FHF; n=49), chronic active hepatitis (CAH; n=93) and liver cirrhosis (LC; n=48), were analyzed for hepatitis A-G viral markers. TTV DNA was detected in all cases by nested polymerase chain reaction (PCR) using the primers from N22 and untranslated (UTR) region. TTV-DNA was also tested in 150 volunteer blood donors. Direct nucleotide sequencing of N22 amplicons were carried out to look into the prevalent TTV genotypes. Results: TTV-DNA was detected in 73.6, 59.2, 21.5 and 29.1 per cent cases with AVH, FHF, CAH and cirrhosis, respectively. In AVH and FHF groups, TTV showed co-infection with all A-G hepatitis cases whereas in CAH and cirrhosis groups, TTV co-infection observed with HBV, HCV and HGV. TTV-DNA was detected in 45.3 per cent volunteer blood donors. No statistically significant difference was observed amongst the mean liver function profile of UTR PCR positive and negative cases in different liver disease groups except AVH cases, in whom the various biochemical parameters between TTV positive and TTV negative patients were marginally significant. However, no significant evidence of biochemical or histological deterioration of the liver was observed in TTV positive cases amongst FHF, CAH and cirrhosis. Predominance of genotype 1a was observed in all the cases from north India. Interpretation & conclusions: TTV is a frequent virus isolated from patients with various types of liver diseases as well as in healthy individuals from northern India. TTV has no effect on biochemical markers of associated liver diseases. Genotype 1a was the most predominant type in different liver disease groups. The occurrence of TTV did not further influence the course of the disease.


Subject(s)
Adult , Base Sequence , DNA Primers , Humans , Middle Aged , Polymerase Chain Reaction , Torque teno virus/genetics , Torque teno virus/isolation & purification
9.
Int. j. morphol ; 26(2): 363-372, jun. 2008. ilus
Article in English | LILACS | ID: lil-549959

ABSTRACT

Torque Teno virus (TTV) is an infectious agent of worldwide distribution isolated by the first time as the agent of an acute post-transfusion hepatitis in a patient in Japan. It has been classified into a new floating genus called Anellovirus. Recent studies showed that TTV can also be identified in serum specimens obtained from domesticated farm animals and from non-human primates. To better understand the relationship between TTV and their hosts, a study to detect virus in the serum and whole blood of Brazilian non-human primates and in the plasm of chickens was performed by applying the PCR-UTR-A technique, followed by a genomic sequence and phylogenetic analysis. By nested-PCR-UTR, the DNA of TTV was detected in sera from 4 (5.3 percent) of 75 Cebus apella, 2 (40 percent) of 5 Alouatafusca, 1 (20 percent) of 5 Alouata caraya, 1 (5.2 percent) of 19 Callithrixpenicilata, 1 (4 percent) of 25 Callithrixjacchus, 1 (20 percent) of 5 Saimiri sciureus and 1 (25 percent) of 4 Leontopithecus chrysomelas. Phylogenetic analysis revealed that sequences detected in 8 samples clustered with TTV sequences So-TTV2 (Sagüínus oedipus) and At-TTV3 (Aotes Trivirgatus). Three sequences showed similarity with a human Torque Teno Minivirus (TLMV). TTV ORF2 DNA was detected in one sera sample and one whole blood sample of non-human primates and in one plasm sample of chicken. Phylogenetic analysis revealed that the sequences amplified by the ORF2 region show no difference between human, non-human primates and chicken. This is the first report of TTV in Brazilian new world non-human primates and chicken.


Torque Teno virus (TTV) es una agente infeccioso de distribución mundial, aislado por primera vez como el agente de una hepatitis aguda posterior a la transfusión de un paciente en Japón. Se ha clasificado en un nuevo género flotante llamado Anellovirus. Recientes estudios han demostrado que TTV también puede ser identificado en el suero de especímenes obtenidos desde granjas de animales domésticos y desde primates no humanos. Para entender mejor la relación entre la TTV y sus huéspedes, fue realizado un estudio para detectar el virus en el suero y la sangre de primates no humanos brasileños y en el plasma de pollos mediante la aplicación de la técnica PCR-UTR-A, seguida de una secuencia genómica y análisis filogenético. Por medio de PCR-UTR-anidado, el ADN de TTV fue detectado en sueros de 4 de 75 (5,3 por ciento)Cebus apella, 2 de 5 (40 por ciento) Alouata fusca, 1 de 5 (20 por ciento) de Alouata caraya, 1 de 19 (5,2 por ciento) de Callithrixpenicilata, 1 de 25 (4 por ciento) Callithrixjacchus, 1 de 5 (20 por ciento) de Saimiri sciureus y 1 de 4 (25 por ciento) de Leontopithecus chrysomelas. El análisis filogenético reveló secuencias detectadas en 8 muestras agrupadas con TTV secuencias So-TTV2 (Sagüínus oedipus) y At-TTV3 (Aotes Trivirgatus). Tres secuencias mostraron similitud con el Torque Teno Minivirus humano (TLMV). Fue detectado TTV ORF2 ADN en una muestra de suero y una muestra de sangre de primates no-humanos y en una muestra de plasma de pollo. El análisis filogenético reveló que las secuencias amplificadas por la región ORF2 no muestran ninguna diferencia entre humanos, primates no humanos y pollos. Este es el primer informe de nuevos TTV en primates-no humanos brasileños y en pollos.


Subject(s)
Animals , Poultry Diseases/virology , Primate Diseases/virology , DNA Virus Infections/genetics , DNA Virus Infections/veterinary , Torque teno virus/isolation & purification , DNA, Viral/genetics , Amino Acid Sequence , Brazil , Poultry Diseases/genetics , Primate Diseases/genetics , Genome, Viral , DNA Virus Infections/virology , Phylogeny , Polymerase Chain Reaction , Chickens/virology , Primates/virology , Sequence Analysis, DNA , Torque teno virus/genetics , Untranslated Regions
10.
Int. j. morphol ; 26(2): 377-384, jun. 2008. ilus
Article in English | LILACS | ID: lil-549961

ABSTRACT

Torque teno virus (TTV) is a recently discovered DNA virus that was originally isolated from a Japanese patient (initials, TT) with post-transfusion hepatitis of unknown aetiology. TTV is an circular DNA virus classified recently together with related Torque teño minivirus, into a new genus called Anellovirus. Infection TTV has been detected in a range of non-human primates as well as domestic animals. The purpose of this study was to search TTV in the serum and total blood of Brazilian monkeys and in plasma of domestic chickens by seminested PCR of coding region (N22), followed by a genomic sequence and phylogenetic analysis. No serum sample was amplified. TTV DNA was detected in total blood from 3 (4 percent) out of 75 brown-capuchin (Cebus apella) and from 1 (25 percent) out of 4 golden-headed lion-tamarin (Leontopithecus chrysomelas). Phylogenetic analysis revealed that one sample showed similarity with one sequence of the cotton top tamarin (Saguinus oedipus) (So-TTV2) and with one of the douroucoulis (ão tes trivirgatus) (At-TTV3). Two samples showed similarity with a human Torque Teño Mini Virus (TLMV). The other sample clustered with one sequence of the chimpanzee (Pt-TTV6) and with the human TTV strain TA278. The plasma chicken samples tested were all negative. The amino acid sequences reported in this study are the first obtained in Brazil from total blood of non-human primates naturally infected by TTV.


Torque teno virus (TTV) es un virus de ADN recientemente descubierto que fue inicialmente aislado de un paciente japonés (iniciales TT) después de la transfusión de hepatitis de etiología desconocida. TTV es un virus de ADN circular recientemente clasificado junto con los torque teno minivirus, en un nuevo género llamado Anellovirus. La infección de TTV se ha detectado en una serie de primates no humanos, así como animales domésticos. El objetivo de este estudio fue buscar TTV en el suero y sangre total de monos de Brasil y en el plasma de pollos domésticos, por seminested PCR de la región de codificación (N22), seguido de una secuencia genómica y el análisis filogenético. Las muestras que no eran suero fueron amplificadas. TTV DNA se detectó en sangre total de 3 (4 por ciento) de un total de 75 capuchinos de cabeza dura (Cebus apella) y de 1 (25 por ciento) de un total de 4 tití- león de cabeza dorada (Leontopithecus chrysomelas). El análisis filogenético demostró que una muestra presentaba similitud con una secuencia de Saguinus Edipo (So-TTV2) y con una de Aotes trivirgatus (A-TTV3). Dos muestras mostraron similitud con un torque teno mini virus (TLMV) humano. La otra muestra agrupada con una secuencia de los chimpancés (PT-TTV6) y con el TTV humanos cepa TA278. El análisis de las muestras de plasma de pollo fueron negativas Las secuencias de aminoácidos que se reportan en este estudio son las primeras obtenidas en Brasil de sangre de primates no humanos infectados naturalmente por TTV.


Subject(s)
Poultry Diseases/virology , Primate Diseases/virology , DNA Virus Infections/genetics , DNA Virus Infections/blood , DNA Virus Infections/veterinary , Torque teno virus/isolation & purification , DNA, Viral/genetics , DNA, Viral/blood , Amino Acid Sequence , Brazil , Poultry Diseases/genetics , Poultry Diseases/blood , Primate Diseases/genetics , Primate Diseases/blood , Genome, Viral , Phylogeny , Polymerase Chain Reaction , Chickens/virology , Primates/virology
11.
Annals of Saudi Medicine. 2006; 26 (6): 444-449
in English | IMEMR | ID: emr-76039

ABSTRACT

In Saudi Arabia, the epidemiology and clinical significnance of Torque Teno virus [TTV] infection alone and in patients with hepatitis virus infections have not been determined in a single study. In this paper, we molecularly investigated the rate and genotypes of TTV infection among Saudi Arabian blood donors and patients with viral hepatitis. The effect of TTV coinfection on viral hepatitis was also examined. DNA was extracted from the sera of 200 healthy blood volunteers, 45 hepatitis B virus patients, 100 hepatitis C virus patients, 19 hepatitis G virus patients, and 56 non-A-G hepatitis patients. TTV DNA was amplified using primers derived from the ORF1 and 5'UTR regions. The alanine aminotransferase [ALT] level was determined for each specimen. Sequencing of ORF1 amplicons was carried out to investigate TTV genotypes. Using primers derived from ORF1 and 5'UTR, TTV DNA was detected in 5.5% and 50.5%, respectively, of healthy blood donors, in 2.2% and 88.8% in hepatitis B patients, in 2.0% and 70% of hepatitis C patients, in 15.8% and 100% of hepatitis G patients, in 5.4% and 12.5% of non-A-G hepatitis patients and in 4.8% and 56.4% overall. No detrimental effect of TTV coinfection in viral hepatitis patients was noted. An overall prevalence of 4.8% and 56.4% was established. Phylogenetic analysis indicated that the most common genotype of TTV among Saudis is 2c. The rate of TTV infection among Saudi Arabians seems to be lower than that stated in previous reports on Saudi Arabia and in some other countries. The virus does not seem to worsen the status of those who are suffering from viral hepatitis infection


Subject(s)
Humans , Torque teno virus/isolation & purification , Torque teno virus/classification , Blood Donors , DNA Virus Infections/virology , Genotype , Hepatitis, Viral, Human/blood , Hepatitis, Viral, Human/virology , Molecular Sequence Data , DNA Primers
12.
Braz. j. med. biol. res ; 38(6): 853-860, June 2005. ilus, tab
Article in English | LILACS | ID: lil-402676

ABSTRACT

Torque teno virus (TTV) is a circular, single-stranded DNA virus that chronically infects healthy individuals of all ages worldwide. TTV has an extreme genetic heterogeneity which is reflected in its current classification into five main phylogenetic groups (1-5). Using specific PCR assays, it has been shown that many individuals are co-infected with TTV isolates belonging to different phylogenetic groups. Here, a multiplex PCR assay was developed, using five recombinant plasmids. Each plasmid carried an insert of different size issued from a TTV isolate belonging to a different group. The assay was able to simultaneously amplify DNAs of TTV isolates belonging to all five phylogenetic groups. Multiplex PCR was then tested satisfactorily on DNAs extracted from 55 serum samples (47 health care workers and 8 AIDS patients). All individuals but nine were infected with at least one TTV isolate. Co-infection with multiple isolates was found in 29/47 (62 percent) health care workers and in 8/8 (100 percent) AIDS patients. A number of discrepancies were observed when results obtained with three thermostable DNA polymerases were compared. For example, four TTV phylogenetic groups were detected in a particular serum sample by using one of the three DNA polymerases, whereas the other two enzymes were able to detect only three TTV groups. However, none of the three enzymes used could be broadly considered to be more efficient than the others. Despite its limitations, the assay described here constitutes a suitable tool to visualize the degree of co-infection of a given population, avoiding time-consuming experiments.


Subject(s)
Humans , Male , Acquired Immunodeficiency Syndrome/virology , DNA Virus Infections/virology , DNA, Viral/analysis , Phylogeny , Polymerase Chain Reaction/methods , Torque teno virus/genetics , Electrophoresis, Agar Gel , Torque teno virus/isolation & purification
13.
Scientific Journal of Al-Azhar Medical Faculty [Girls][The]. 2005; 26 (1): 313-322
in English | IMEMR | ID: emr-112378

ABSTRACT

SENV is the latest viral agent that has been proposed as a cause of NANE hepatitis. It appears to be endemic throughout the world since it has been found in many countries, although with different incidence. The prevalence of SENV-D and SENV-H in polytransfused cases such as chronic renal failure on maintenance haemodialysis was significantly higher. This study was conducted on 75 subjects; 50 polytransfused cases of chronic renal failure on maintenance haemodialysis and 25 normal healthy subjects as a control. Blood samples were collected and PCR was performed for detection of SENV-D and SENV-H in patients group and control. SENV-H viraemia were detected in five patients out of fifty [10%]; one case was positive for SENV-H alone [2%] while four cases were coinfected of SENV-H with HCV [8%]. They were all negative for SENV-D. Neither SENV-D nor SENV-H was detected in control group. No significant difference in the severity of liver affection reflected by the mean transaminase [AST and ALT] levels was found between SENV positive and SENV negative patients group [P >0.05]


Subject(s)
Humans , Male , Female , Torque teno virus/isolation & purification , Renal Dialysis , Blood Transfusion/adverse effects , Hepatitis, Viral, Human/virology , Polymerase Chain Reaction/methods
14.
Article in English | IMSEAR | ID: sea-64681

ABSTRACT

BACKGROUND: TTV DNA has been reported in patients with a broad spectrum of hepatic disorders as well as in healthy people. AIM: To clarify the role of TTV in children with liver disease and in healthy children. METHODS: Degenerate primers designed to amplify a target sequence from the ORF 1 region of TTV genome were used for nested PCR, to detect TTV DNA in sera. RESULTS: TTV was detected in 3 of 18 children with chronic hepatitis B (16.7%), 2 of 17 hepatitis B carriers (11.8%), 2 of 17 children with cryptogenic chronic liver disease (11.8%), and 1 of 40 (2.5%) children without liver disease. The infection rate was similar among the various study groups and in the various age groups. There was no difference between TTV positive and negative children in respect to gender, history of surgery, parenteral treatment, transfusion of blood and blood products, presence of hepatomegaly, splenomegaly, jaundice, and transaminase values. CONCLUSION: TTV does not seem to have an etiologic role in cryptogenic liver disease in children and does not seem to influence the clinical course of liver disease.


Subject(s)
Age Distribution , Case-Control Studies , Child , Child, Preschool , Cohort Studies , DNA Virus Infections/epidemiology , DNA, Viral/analysis , Female , Hepatitis B, Chronic/epidemiology , Hepatitis, Viral, Human/epidemiology , Humans , Liver Function Tests , Male , Polymerase Chain Reaction/methods , Prevalence , Prognosis , Reference Values , Risk Assessment , Severity of Illness Index , Sex Distribution , Statistics, Nonparametric , Torque teno virus/isolation & purification , Turkey/epidemiology
15.
Rio de Janeiro; s.n; nov. 2002. x,107 p. ilus, tab.
Thesis in Portuguese | LILACS | ID: lil-349689

ABSTRACT

O TTV é um novo vírus humano não envelopado, com um genoma de DNA circular de fita simples com polaridade negativa; foi primeiro identificado no sangue de uma paciente com hepatite pós-transfusional de etiologia desconhecida. Neste trabalho utilizando três ensaios de PCR de diferentes regiões do genoma para determinar a prevalência do TTV em diferentes faixas etárias. Foram coletadas 130 amostras de sangue de crianças e adultos que visitaram o Hospital Universitário da UFSC, em Florianópolis, SC. para atendimento ambulatorial. A prevalência de TTV no soro, utilizando pelo menos um ensaio de PCR, foi de 44 por cento em adultos e de 73 por cento no soro de crianças até 10 anos de idade. Resultados mostram uma alta prevalência da infecção por TTV no sul do Brasil. Recentemente, um outro vírus DNA, circular, não envelopado de fita simples, foi isolado do soro de doadores de sangue japoneses e foi denominado como TTV-Like Mini Virus (TLMV). Pouco é conhecido sobre a prevalência de TLMV em humanos. A prevalência da infecção por TLMV determinada por PCR em 184 amostras de sangue coletadas em pacientes de Florianópolis, SC. foi de 78 por cento, os produtos de PCR dos soros de três pacientes (pacientes A-C) foram clonados e as seqüências nucleotídicas de um total de 16-19 clones de cada paciente foram determinadas. Oito diferentes seqüências foram obtidas para 19 clones derivados do paciente A, 10 seqüências distintas para 17 clones derivado do paciente B e quinze dos 16 clones derivados do paciente C foram idênticos, apresentando apenas duas seqüências distintas. Estes dados sugerem que adultos e crianças estão freqüentemente coinfectados com vários isolados de TLMV de origens diferentes.O TTV apresenta uma grande diversidade genética, apesar de ser um vírus DNA e numerosos variantes altamente divergentes foram identificados. Estes genótipos foram classificados em quatro grupos filogenéticos. Quatro isolados, originários de pacientes japoneses foram denominados vírus YONBAN, pertencendo ao genótipo 21 foi padronizado. Com este ensaio, 48/184 (36 por cento) das amostras de soro e 76/167 (46 por cento) das amostras de saliva, coletadas de pacientes ambulatoriais não selecionados, foram positivos. Verificou-se entre os índios pertencentes a três grupos étnicos da região amazônica, que 18/137 (49 por cento) eram positivos. A análise filogenética mostrou que três isolados de índios formavam um subgrupo separado dentro do genótipo 21.


Subject(s)
Humans , Child , Adult , Blood , DNA Virus Infections , DNA, Circular , Patients , Polymerase Chain Reaction/methods , Serology , Torque teno virus/genetics , Torque teno virus/isolation & purification
16.
Southeast Asian J Trop Med Public Health ; 2001 Dec; 32(4): 814-22
Article in English | IMSEAR | ID: sea-36221

ABSTRACT

TT virus is a novel DNA virus widely distributed in the general population. We examined the prevalence of TTV infection in a population with acute non-A to E hepatitis and in comparison groups located in Northern Thailand. The prevalence of TTV in subjects with non-A-E hepatitis was 19% (21/112), 6% (4/72) in healthy volunteers, 17% (12/72) in those with hepatitis A or B, and 17% (8/48) in hospitalized patients with non-hepatitis illnesses. A significant association with TTV infection and non-A-E hepatitis was seen in all groups (OR 3.9, p = 0.02) and in children (OR 25.8, p = 0.001). Among subjects with non-A-E hepatitis, TTV was associated with higher alanine aminotransferase (ALT) and aspartate aminotransferase (AST) levels (significant for AST, p = 0.02). Our observations suggest that TTV in our study population may be associated with non-A-E hepatitis and that children in particular may be at risk of hepatocellular injury as a result of TTV infection.


Subject(s)
Adolescent , Adult , Alanine Transaminase/blood , Aspartate Aminotransferases/blood , Base Sequence , Child , DNA Primers , DNA Virus Infections/complications , Female , Hepatitis, Viral, Human/complications , Humans , Liver/enzymology , Male , Prevalence , Thailand/epidemiology , Torque teno virus/isolation & purification
17.
Mem. Inst. Oswaldo Cruz ; 96(4): 519-522, May 2001. tab
Article in English | LILACS | ID: lil-285559

ABSTRACT

TT virus (TTV) is a newly described nonenveloped human virus, with a circular, negative-stranded DNA genome, that was first identified in the blood of a patient with posttransfusion hepatitis of unknown etiology. PCR primers and conditions used for TTV DNA amplification may greatly influence the level of TTV detection in serum. Three PCR assays, with different regions of the genome as targets, were used to test TTV DNA in 130 sera from children and adults visiting a hospital in the south of Brazil, most of them for routine procedure. Forty-four percent of adult sera and 73 percent of sera from children aged 0-10 years were TTV positive with at least one PCR assay. However, the three assays were able to detect only 33 percent, 35 percent, and 70 percent of the total positive samples. Our results showed a high prevalence of TTV infection in the south of Brazil, particularly among young children, and confirmed the necessity of performing several PCR assays to assess the true TTV prevalence in a determined population


Subject(s)
Humans , Male , Female , Infant, Newborn , Infant , Child, Preschool , Child , Adolescent , Adult , Middle Aged , DNA Virus Infections/epidemiology , Polymerase Chain Reaction/methods , Torque teno virus/isolation & purification , Aged, 80 and over , Brazil/epidemiology , Diagnostic Tests, Routine , DNA Primers , DNA Virus Infections/blood , DNA Virus Infections/diagnosis , DNA, Viral/blood , DNA, Viral/isolation & purification , Nucleic Acid Amplification Techniques/methods , Prevalence , Seroepidemiologic Studies , Torque teno virus/genetics
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